These Lemon Cream Cheese Muffins combine a soft, lemon-flavored muffin with a creamy cheesecake-style filling, buttery streusel crumbs, and a simple lemon glaze. Fresh lemon zest and lemon juice give the muffins a bright citrus flavor, while Greek yogurt helps create a tender texture. Each muffin is filled with a sweet cream cheese center and finished with generous crumbs before baking. They make an easy breakfast or dessert for anyone who loves lemon desserts, and the combination of creamy filling, golden streusel, and lemon glaze makes them especially inviting when served fresh.
Quick Recipe Snapshot
- Prep Time: 15 minutes
- Cook Time: 25 minutes
- Yield: 12 muffins
- Category: Breakfast/Dessert
- Method: Bake
- Cuisine: American
Why You’ll Love These Lemon Cream Cheese Muffins
- Bright lemon flavor: Lemon zest, lemon juice, and lemon extract give the muffins a distinct citrus flavor.
- Creamy center: A sweet cream cheese filling sits in the middle of each muffin.
- Buttery streusel topping: Coarse crumbs add a delicious baked topping and extra texture.
- Simple lemon glaze: Powdered sugar and lemon juice create an easy finishing drizzle.
- Perfect for breakfast or dessert: These muffins work for a morning treat, afternoon baking, or a sweet dessert.
Ingredients
Streusel Crumb Topping
- 1 cup all-purpose flour
- 1/4 cup light brown sugar
- 1/4 cup granulated sugar
- 1/4 teaspoon salt
- 6 Tablespoons unsalted butter, melted
Lemon Muffins
- 1 1/2 cups all-purpose flour
- 1/4 teaspoon salt
- 1/2 teaspoon baking powder
- 1/4 teaspoon baking soda
- 1/3 cup unsalted butter, softened
- 3/4 cup granulated sugar
- 2 eggs
- 2 Tablespoons lemon zest
- 1 teaspoon vanilla
- 1 teaspoon lemon extract
- 2/3 cup Greek yogurt
- 2 Tablespoons lemon juice
Cream Cheese Filling
- 8 oz. cream cheese, room temperature
- 1/4 cup granulated sugar
- 1 teaspoon vanilla
Glaze
- 3/4 cup powdered sugar
- 1 1/2–2 1/2 teaspoons lemon juice
How to Make Lemon Cream Cheese Muffins
1. Prepare the oven and muffin pan
Preheat the oven to 425°F. Line a 12-count cupcake pan with paper liners and set aside.
2. Make the streusel topping
Stir together the all-purpose flour, light brown sugar, granulated sugar, and salt. Add the melted butter and whisk with a fork until coarse crumbs form. Set the streusel aside while you prepare the muffin batter.
3. Mix the dry muffin ingredients
In a bowl, whisk together the flour, baking soda, baking powder, and salt. Set aside.
4. Make the lemon muffin batter
In a large bowl, mix the softened butter and granulated sugar at high speed for about 2 minutes.
Add the eggs, lemon zest, vanilla, and lemon extract. Mix for another 2 minutes.
Add the Greek yogurt and lemon juice and mix just until combined. With the mixer running on low, mix in the dry ingredients.
5. Prepare the cream cheese filling
Mix the room-temperature cream cheese, granulated sugar, and vanilla just until combined.
6. Assemble the muffins
Add 1 heaping Tablespoon of muffin mixture to each lined muffin cup.
Drop 1 Tablespoon of the cream cheese mixture into the center of each muffin. Cover the cream cheese filling with the remaining muffin mixture, filling each cup about 2/3 to 3/4 full.
Generously top each muffin with the prepared streusel crumbs.
7. Bake
Place the muffins in the preheated oven and immediately reduce the temperature to 350°F.
Bake for 22–25 minutes, or until the tops are golden brown and the center has set.
8. Cool the muffins
Let the muffins cool in the pan for 5–10 minutes, then transfer them to a rack to cool completely.
9. Make the lemon glaze
Meanwhile, stir the powdered sugar with the lemon juice. Start with 1 teaspoon of lemon juice and gradually add more until the desired consistency is reached.
Drizzle the glaze over the cooled muffins and serve.
Important Cooking Tips
- Start with softened butter: The muffin batter calls for softened butter, so use it as specified for the mixing step.
- Use room-temperature cream cheese: The filling specifically calls for room-temperature cream cheese, which makes it easier to mix with the sugar and vanilla.
- Don’t skip the streusel: Generously topping each muffin with the coarse crumbs gives the finished muffins their buttery crumb topping.
- Follow the temperature change: The muffins begin baking at 425°F, then the oven temperature is reduced to 350°F. This temperature change is part of the original method.
- Check the center: The muffins are ready when the tops are golden brown and the center has set.
- Add the glaze after cooling: Let the muffins cool completely before drizzling them with the lemon glaze.
Simple Variations
Extra Lemon Flavor
For a more pronounced citrus finish, use the full amount of lemon juice specified for the glaze and drizzle it generously over the cooled muffins.
More Streusel on Top
If you especially enjoy a crumb topping, make sure each muffin receives a generous amount of the prepared streusel before baking.
Thicker or Thinner Glaze
Adjust the glaze consistency gradually by adding the lemon juice little by little, starting with 1 teaspoon as directed.
Serving Ideas
- Serve these lemon muffins for breakfast alongside other baked breakfast favorites.
- Add them to a brunch spread for a bright citrus option.
- Serve one as an afternoon sweet treat with the lemon glaze freshly drizzled on top.
- Arrange them on a dessert platter for a simple lemon dessert.
- Let the muffins cool completely before serving so the cream cheese center and glaze are set.
Frequently Asked Questions
What makes these Lemon Cream Cheese Muffins special?
They combine several textures and flavors in one muffin: a soft lemon muffin, creamy cream cheese filling, buttery streusel topping, and sweet lemon glaze.
How many muffins does this recipe make?
The recipe yields 12 muffins using a 12-count cupcake pan.
Why does the oven temperature change during baking?
The muffins are placed into an oven preheated to 425°F, then the temperature is reduced to 350°F for the remaining bake. This is the specified baking method for the recipe.
When are the muffins done?
Bake for 22–25 minutes, or until the tops are golden brown and the center has set.
How do I make the lemon glaze?
Stir together 3/4 cup powdered sugar and lemon juice. Start with 1 teaspoon of lemon juice and gradually add more until the glaze reaches your desired consistency.
Final Thoughts
These Lemon Cream Cheese Muffins bring together bright lemon flavor, a creamy center, buttery streusel, and a simple citrus glaze in one easy baked treat. With a 15-minute prep time and a yield of 12 muffins, they are a lovely choice when you want something homemade for breakfast or dessert. Save this recipe for your next lemon baking day and enjoy the combination of textures in every bite.
PrintLemon Cream Cheese Muffins with Streusel Crumb Topping
Lemon Cream Cheese Muffins are soft, bright, and flavorful muffins filled with a creamy sweet cream cheese center, topped with buttery streusel crumbs and finished with a lemon glaze.
- Prep Time: 15 minutes
- Cook Time: 25 minutes
- Total Time: 40 minutes
- Yield: 12 muffins 1x
- Category: Breakfast, Dessert
- Method: Bake
- Cuisine: American
Ingredients
- Streusel Crumb Topping:
- 1 cup all-purpose flour
- 1/4 cup light brown sugar
- 1/4 cup granulated sugar
- 1/4 teaspoon salt
- 6 Tablespoons unsalted butter, melted
- Lemon Muffins:
- 1 1/2 cups all-purpose flour
- 1/4 teaspoon salt
- 1/2 teaspoon baking powder
- 1/4 teaspoon baking soda
- 1/3 cup unsalted butter, softened
- 3/4 cup granulated sugar
- 2 eggs
- 2 Tablespoons lemon zest
- 1 teaspoon vanilla
- 1 teaspoon lemon extract
- 2/3 cup Greek yogurt
- 2 Tablespoons lemon juice
- Cream Cheese Filling:
- 8 oz. cream cheese, room temperature
- 1/4 cup granulated sugar
- 1 teaspoon vanilla
- Glaze:
- 3/4 cup powdered sugar
- 1 1/2–2 1/2 teaspoons lemon juice
Instructions
- Preheat the oven to 425°F. Line a 12-count cupcake pan with paper liners and set aside.
- To make the crumb topping, stir together flour, sugar, brown sugar, and salt. Add melted butter and whisk with a fork until coarse crumbs form. Set aside.
- To make the lemon muffin mixture, whisk dry ingredients (flour, baking soda, baking powder and salt) and set aside.
- In a large bowl, mix softened butter and sugar for about 2 minutes at high speed. Add eggs, lemon zest, vanilla, and lemon extract and mix for 2 more minutes. Add Greek yogurt and lemon juice and mix just to combine. Running your mixer on low, mix in dry ingredients.
- To make the cream cheese filling, mix softened cream cheese, sugar, and vanilla just to combine.
- To assemble the muffins, add 1 heaping Tablespoon of muffin mixture in each cup. Drop 1 Tablespoon of cream cheese mixture in the center of each muffin. Cover cream cheese filling with muffin mixture, filling each cup about 2/3 to ¾ full.
- Generously top each muffin with streusel crumbs.
- Place in the preheated oven and reduce the temperature to 350°F. Bake 22-25 minutes, or until the tops are golden brown and the center has set.
- Cool 5-10 minutes in the pan, then transfer the muffins to a rack to cool completely.
- Meanwhile, prepare the glaze. Stir powdered sugar with lemon juice. Start with 1 teaspoon of the juice and gradually add more until the desired consistency is reached.
- Drizzle the glaze over the muffins and serve.
Notes
- Reduce the oven temperature from 425°F to 350°F immediately after placing the muffins in the oven.
- Start the glaze with 1 teaspoon of lemon juice and gradually add more until the desired consistency is reached.



